You are viewing the site in preview mode

Skip to main content

Table 1 Number of significant associations identified

From: Identifying causal models between genetically regulated methylation patterns and gene expression in healthy colon tissue

  Normal (n = 132) Adjacent (n = 95) Tumor (n = 95)
mQTLs 439,043 227,934 56,666
independent mQTLs 8195 4229 840
CpGs 6713 4167 850
CpGs blocks 4524 2845 645
SNPs 246,758 141,207 38,751
SNPs blocks 8064 4138 840
eQTMs 557 290 1732
independent eQTMs 165 78 490
Genes 158 78 487
CpGs 482 253 1563
CpGs blocks 155 75 466
eQTLs 32,446 17,274 8530
independent eQTLs 658 279 82
Genes 374 220 80
SNPs 31,482 17,070 8395
SNPs blocks 650 274 79
meQTLs 13,987 5517 1926
independent meQTLs 54 19 6
Genes 52 19 6
CpGs 114 45 16
CpGs blocks 51 19 6
SNPs 6850 2720 1231
SNPs blocks 54 19 6